BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F06SP1|AL428249
(1036 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig532 1979 0.0
>3x_Contig532
Length = 2251
Score = 1979 bits (996), Expect = 0.0
Identities = 1028/1036 (99%), Gaps = 4/1036 (0%)
Strand = Plus / Minus
Query: 1 gatcatgcttcttcgccgattcttcaaattctctcttctcgcgctctagatggaaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2138 gatcatgcttcttcgccgattcttcaaattctctcttctcgcgctctagatggaaaggat 2079
Query: 61 cattcgctttatcttgggcatcttctttttcctgctgcctcttcacagcaagctccaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2078 cattcgctttatcttgggcatcttctttttcctgctgcctcttcacagcaagctccaacc 2019
Query: 121 tctgtaattgctcttcaatcttcttcttacgctcttccatatcgagtttctgatctttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2018 tctgtaattgctcttcaatcttcttcttacgctcttccatatcgagtttctgatctttgt 1959
Query: 181 tcaaatcatcgataaactttctaacttctttcctgactttatcaacgtcttcatccgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1958 tcaaatcatcgataaactttctaacttctttcctgactttatcaacgtcttcatccgtag 1899
Query: 241 gctccttttcaaaccgattctgcatcaagttgagcttaccggaatggaacgtacggcata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 gctccttttcaaaccgattctgcatcaagttgagcttaccggaatggaacgtacggcata 1839
Query: 301 cgtcgtttcgtaacaatatcagcgaacgcccctttggaactttgtacaacgccctactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1838 cgtcgtttcgtaacaatatcagcgaacgcccctttggaactttgtacaacgccctactgg 1779
Query: 361 ccacagactttacgccaagcctagataccggccttattaaatggaacattgcaagtcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 ccacagactttacgccaagcctagataccggccttattaaatggaacattgcaagtcact 1719
Query: 421 tcaatgtaataaaaccaccacgtcgctgctacggttagccgagtctgattgtctataccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1718 tcaatgtaataaaaccaccacgtcgctgctacggttagccgagtctgattg-ctataccg 1660
Query: 481 tttacctaacaggacttttcgaatttaaaaccagtggaaaatctttgttaacaccgaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 tttacctaacaggacttttcgaatttaaaaccagtggaaaatctttgttaacaccgaaac 1600
Query: 541 aaaccgagacaaaaacagccgtttcaacaaacacctggctattttacactactatagggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 aaaccgagacaaaaacagccgtttcaacaaacacctggctattttacactactatagggt 1540
Query: 601 cttaaattcacaatgcaaccactgtagattgcraatgtaactgctaacgctccttttatc 660
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1539 cttaaattcacaatgcaaccactgtagattgcaaatgtaactg-taacgctccttttatc 1481
Query: 661 ggtggcaaatggccttgtctgttcaccttatggggttgttctggttgaaaagcccaaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 ggtggcaaatggccttgtctgttcaccttatggggttgttctggttgaaaagcccaaatt 1421
Query: 721 catttttggtagagcaaggacatatcgttacccggccacttagtataatacactcttatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 catttttggtagagcaaggacatatcgttacccggccacttagtataatacactcttatt 1361
Query: 781 acgtatgttgagatatacacgtatacatgggaggtcagttcagctatgttataggcttkt 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1360 acgtatgttgagatatacacgtatacatgggaggtcagttcagctatgttataggcttgt 1301
Query: 841 ttcgaatctcttttgttcttctatagcagcgactatatcttcgtccaagatgtcttcgta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 ttcgaatctcttttgttcttctatagcagcgactatatcttcgtccaagatgtcttcgta 1241
Query: 901 catcgatgtagggacgtcagaragaccggtgcaaggtcttgctaggtcaagagcttttga 960
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 1240 catcgatgtagggacgtcagaaagaccggtgcaaggtcttgctaggtcaagagc-tttga 1182
Query: 961 ttcttgtttcgtacataacttggcttgtgtttcctttcactttcttcactgawatcactc 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1181 ttcttgtttcgtacataacttggcttgtgtttcctttcactttcttcactgatatcactc 1122
Query: 1021 ttcgtcgattgtgtgg 1036
|||||||||||||||
Sbjct: 1121 -tcgtcgattgtgtgg 1107
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6833
Number of Sequences: 1807
Number of extensions: 6833
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1036
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1020
effective length of database: 10,329,639
effective search space: 10536231780
effective search space used: 10536231780
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)